Луис Кинтана-Мурси – Люди. По следам наших миграций, приспособлений и поисков компромиссов (страница 58)

Ongaro, L., Scliar, M. O., Flores, R., Raveane, A., Marnetto, D., Sarno, S., Gnecchi-Ruscone, G. A., et al., «The Genomic Impact of European Colonization of the Americas», Curr. Biol., 29, 23 (2019), p. 3974–3986, e4.

Oota, H., Settheetham-Ishida, W., Tiwawech, D., Ishida, T., Stoneking, M., «Human Mtdna and Y-Chromosome Variation Is Correlated with Matrilocal Versus Patrilocal Residence», Nat. Genet., 29, 1 (2001), p. 20–21.

Owers, K. A., Sjodin, P., Schlebusch, C. M., Skoglund, P., Soodyall, H., Jakobsson, M., «Adaptation to Infectious Disease Exposure in Indigenous Southern African Populations», Proc. Biol. Sci., 284, 1852 (2017).

Pagani, L., Kivisild, T., Tarekegn, A., Ekong, R., Plaster, C., Gallego Romero, I., Ayub, Q., et al., «Ethiopian Genetic Diversity Reveals Linguistic Stratification and Complex Influences on the Ethiopian Gene Pool», Am. J. Hum. Genet., 91, 1 (2012), p. 83–96.

Patin, E., Hasan, M., Bergstedt, J., Rouilly, V., Libri, V., Urrutia, A., Alanio, C., et al., «Natural Variation in the Parameters of Innate Immune Cells Is Preferentially Driven by Genetic Factors», Nat. Immunol., 19, 3 (2018), p. 302–314.

Patin, E., Lopez, M., Grollemund, R., Verdu, P., Harmant, C., Quach, H., Laval, G., et al., «Dispersals and Genetic Adaptation of Bantu-Speaking Populations in Africa and North America», Science, 356, 6337 (2017), p. 543–546.

Patin, E., Siddle, K. J., Laval, G., Quach, H., Harmant, C., Becker, N., Froment, A., et al., «The Impact of Agricultural Emergence on the Genetic History of African Rainforest Hunter-Gatherers and Agriculturalists», Nat. Commun., 5 (2014), p. 3163.

Patterson, N., Moorjani, P., Luo, Y., Mallick, S., Rohland, N., Zhan, Y., Genschoreck, T., Webster, T., Reich, D., «Ancient Admixture in Human History», Genetics, 192, 3 (2012), p. 1065–1093.

Petersen, D. C., Libiger, O., Tindall, E. A., Hardie, R. A., Hannick, L. I., Glashoff, R. H., Mukerji, M., et al., «Complex Patterns of Genomic Admixture within Southern Africa», PLoS Genet., 9, 3 (2013), e1003309.

Piasecka, B., Duffy, D., Urrutia, A., Quach, H., Patin, E., Posseme, C., Bergstedt, J., et al., «Distinctive Roles of Age, Sex, and Genetics in Shaping Transcriptional Variation of Human Immune Responses to Microbial Challenges», Proc. Natl Acad. Sci. USA, 115, 3 (2018), E488-E497.

Pickrell, J. K., Patterson, N., Barbieri, C., Berthold, F., Gerlach, L., Guldemann, T., Kure, B., et al., «The Genetic Prehistory of Southern Africa», Nat. Commun., 3 (2012), p. 1143.

Pickrell, J. K., Pritchard, J. K., «Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data», PLoS Genet., 8, 11 (2012), e1002967.

Pierron, D., Heiske, M., Razafindrazaka, H., Pereda-Loth, V., Sanchez, J., Alva, O., Arachiche, A., et al., «Strong Selection During the Last Millennium for African Ancestry in the Admixed Population of Madagascar», Nat. Commun., 9, 1 (2018), p. 932.

Pierron, D., Heiske, M., Razafindrazaka, H., Rakoto, I., Rabetokotany, N., Ravololomanga, B., Rakotozafy, L. M., et al., «Genomic Landscape of Human Diversity across Madagascar», Proc. Natl Acad. Sci. USA, 114, 32 (2017), E6498-E6506.

Pierron, D., Razafindrazaka, H., Pagani, L., Ricaut, F. X., Antao, T., Capredon, M., Sambo, C., et al., «Genome-Wide Evidence of Austronesian-Bantu Admixture and Cultural Reversion in a Hunter-Gatherer Group of Madagascar», Proc. Natl Acad. Sci. USA, 111, 3 (2014), p. 936–941.

Pugach, I., Matveyev, R., Wollstein, A., Kayser, M., Stoneking, M., «Dating the Age of Admixture Via Wavelet Transform Analysis of Genome-Wide Data», Genome Biol., 12, 2 (2011), R19.

Qin, P., Stoneking, M., «Denisovan Ancestry in East Eurasian and Native American Populations», Mol. Biol. Evol., 32, 10 (2015), p. 2665–2674.

Quach, H., Rotival, M., Pothlichet, J., Loh, Y. E., Dannemann, M., Zidane, N., Laval, G., et al., «Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations», Cell, 167, 3 (2016), p. 643–656, e17.

Quintana-Murci, L., Harmant, C., Quach, H., Balanovsky, O., Zaporozhchenko, V., Bormans, C., van Helden, P. D., Hoal, E. G., Behar, D. M., «Strong Maternal Khoisan Contribution to the South African Coloured Population: A Case of Gender-Biased Admixture», Am. J. Hum. Genet., 86, 4 (2010), p. 611–620.

Racimo, F., Gokhman, D., Fumagalli, M., Ko, A., Hansen, T., Moltke, I., Albrechtsen, A., et al., «Archaic Adaptive Introgression in Tbx15/Wars2», Mol. Biol. Evol., 34, 3 (2017), p. 509–524.

Racimo, F., Marnetto, D., Huerta-Sanchez, E., «Signatures of Archaic Adaptive Introgression in Present-Day Human Populations», Mol. Biol. Evol., 34, 2 (2017), p. 296–317.

Racimo, F., Sankararaman, S., Nielsen, R., Huerta-Sanchez, E., «Evidence for Archaic Adaptive Introgression in Humans», Nat. Rev. Genet., 16, 6 (2015), p. 359–371.

Racimo, F., Sikora, M., Vander Linden, M., Schroeder, H., Lalueza-Fox, C., «Beyond Broad Strokes: Sociocultural Insights from the Study of Ancient Genomes», Nat. Rev. Genet., 21, 6 (2020), p. 355–366.

Raj, T., Kuchroo, M., Replogle, J. M., Raychaudhuri, S., Stranger, B. E., De Jager, P. L., «Common Risk Alleles for Inflammatory Diseases Are Targets of Recent Positive Selection», Am. J. Hum. Genet., 92, 4 (2013), p. 517–529.

Ranciaro, A., Campbell, M. C., Hirbo, J. B., Ko, W. Y., Froment, A., Anagnostou, P., Kotze, M. J., et al., «Genetic Origins of Lactase Persistence and the Spread of Pastoralism in Africa», Am. J. Hum. Genet., 94, 4 (2014), p. 496–510.

Reich, D., Patterson, N., Kircher, M., Delfin, F., Nandineni, M. R., Pugach, I., Ko, A. M., et al., «Denisova Admixture and the First Modern Human Dispersals into Southeast Asia and Oceania», Am. J. Hum. Genet., 89, 4 (2011), p. 516–528.

Richerson, P. J., Boyd, R., Henrich, J., «Colloquium Paper: Gene-Culture Coevolution in the Age of Genomics», Proc. Natl Acad. Sci. USA, 107, Suppl. 2 (2010), p. 8985–8992.

Rishishwar, L., Conley, A. B., Wigington, C. H., Wang, L., Valderrama-Aguirre, A., Jordan, I. K., «Ancestry, Admixture and Fitness in Colombian Genomes», Sci. Rep., 5 (2015), p. 12376.

Robinson, M. R., Kleinman, A., Graff, M., Vinkhuyzen, A. E., Couper, D., Miller, M. B., Peyrot, W. J., et al., «Genetic Evidence of Assortative Mating in Humans», Nat. Hum. Behav., 1, 1 (2017), p. 0016.

Rotival, M., Quach, H., Quintana-Murci, L., «Defining the Genetic and Evolutionary Architecture of Alternative Splicing in Response to Infection», Nat. Commun., 10, 1 (2019), p. 1671.

Rotival, M., Siddle, K. J., Silvert, M., Pothlichet, J., Quach, H., Quintana-Murci, L., «Population Variation in Mirnas and Isomirs and Their Impact on Human Immunity to Infection», Genome Biol., 21, 1 (2020), p. 187.

Sams, A. J., Dumaine, A., Nedelec, Y., Yotova, V., Alfieri, C., Tanner, J. E., Messer, P. W., Barreiro, L. B., «Adaptively Introgressed Neandertal Haplotype at the Oas Locus Functionally Impacts Innate Immune Responses in Humans», Genome Biol., 17, 1 (2016), p. 246.

Sankararaman, S., Mallick, S., Patterson, N., Reich, D., «The Combined Landscape of Denisovan and Neanderthal Ancestry in Present-Day Humans», Curr. Biol., 26, 9 (2016), p. 1241–1247.

Scepanovic, P., Alanio, C., Hammer, C., Hodel, F., Bergstedt, J., Patin, E., Thorball, C. W., et al., «Human Genetic Variants and Age Are the Strongest Predictors of Humoral Immune Responses to Common Pathogens and Vaccines», Genome Med., 10, 1 (2018), p. 59.

Schlebusch, C. M., Jakobsson, M., «Tales of Human Migration, Admixture, and Selection in Africa», Annu. Rev. Genomics Hum. Genet., 19 (2018), p. 405–428.

Schlebusch, C. M., Skoglund, P., Sjodin, P., Gattepaille, L. M., Hernandez, D., Jay, F., Li, S., et al., «Genomic Variation in Seven Khoisan Groups Reveals Adaptation and Complex African History», Science, 338, 6105 (012), p. 374–379.

Seielstad, M. T., Minch, E., Cavalli-Sforza, L. L., «Genetic Evidence for a Higher Female Migration Rate in Humans», Nat. Genet., 20, 3 (1998), p. 278–280.

Severe Covid, Gwas Group, Ellinghaus, D., Degenhardt, F., Bujanda, L., Buti, M., Albillos, A., Invernizzi, P., et al., «Genomewide Association Study of Severe COVID-19 with Respiratory Failure», N. Engl. J. Med., 383, 16 (2020), p. 1522–1534.

Shah, A. M., Tamang, R., Moorjani, P., Rani, D. S., Govindaraj, P., Kulkarni, G., Bhattacharya, T., et al., «Indian Siddis: African Descendants with Indian Admixture», Am. J. Hum. Genet., 89, 1 (2011), p. 154–161.

Shelton, J. F., Shastri, A. J., Ye, C., Weldon, C. H., Filshtein-Sonmez, T., Coker, D., Symons, A., et al., «Trans-Ancestry Analysis Reveals Genetic and Nongenetic Associations with COVID-19 Susceptibility and Severity», Nat. Genet., 53, 6 (2021), p. 801–808.

Siddle, K. J., Deschamps, M., Tailleux, L., Nedelec, Y., Pothlichet, J., Lugo-Villarino, G., Libri, V., et al., «A Genomic Portrait of the Genetic Architecture and Regulatory Impact of Microrna Expression in Response to Infection», Genome Res., 24, 5 (2014), p. 850–859.

Sierra, B., Triska, P., Soares, P., Garcia, G., Perez, A. B., Aguirre, E., Oliveira, M., et al., «Osbpl10, Rxra and Lipid Metabolism Confer African-Ancestry Protection against Dengue Haemorrhagic Fever in Admixed Cubans», PLoS Pathog., 13, 2 (2017), e1006220.